Source code for zea.ops.base

import hashlib
import inspect
import json
from functools import partial
from typing import Any, Dict, List, Union

import keras
from keras import ops

from zea import log
from zea.backend import jit
from zea.internal.checks import _assert_keys_and_axes
from zea.internal.core import (
    DataTypes,
)
from zea.internal.registry import ops_registry
from zea.utils import (
    deep_compare,
    map_negative_indices,
)


[docs] def get_ops(ops_name): """Get the operation from the registry.""" return ops_registry[ops_name]
[docs] class Operation(keras.Operation): """ A base abstract class for operations in the pipeline with caching functionality. """ def __init__( self, input_data_type: Union[DataTypes, None] = None, output_data_type: Union[DataTypes, None] = None, key: Union[str, None] = "data", output_key: Union[str, None] = None, cache_inputs: Union[bool, List[str]] = False, cache_outputs: bool = False, jit_compile: bool = True, with_batch_dim: bool = True, jit_kwargs: dict | None = None, jittable: bool = True, additional_output_keys: List[str] = None, **kwargs, ): """ Args: input_data_type (DataTypes): The data type of the input data output_data_type (DataTypes): The data type of the output data key: The key for the input data (operation will operate on this key) Defaults to "data". output_key: The key for the output data (operation will output to this key) Defaults to the same as the input key. If you want to store intermediate results, you can set this to a different key. But make sure to update the input key of the next operation to match the output key of this operation. cache_inputs: A list of input keys to cache or True to cache all inputs cache_outputs: A list of output keys to cache or True to cache all outputs jit_compile: Whether to JIT compile the 'call' method for faster execution with_batch_dim: Whether operations should expect a batch dimension in the input jit_kwargs: Additional keyword arguments for the JIT compiler jittable: Whether the operation can be JIT compiled additional_output_keys: A list of additional output keys produced by the operation. These are used to track if all keys are available for downstream operations. If the operation has a conditional output, it is best to add all possible output keys here. """ super().__init__(**kwargs) self.input_data_type = input_data_type self.output_data_type = output_data_type self.key = key # Key for input data self.output_key = output_key # Key for output data if self.output_key is None: self.output_key = self.key self.additional_output_keys = additional_output_keys or [] self.inputs = [] # Source(s) of input data (name of a previous operation) self.allow_multiple_inputs = False # Only single input allowed by default self.cache_inputs = cache_inputs self.cache_outputs = cache_outputs # Initialize input and output caches self._input_cache = {} self._output_cache = {} # Obtain the input signature of the `call` method self._trace_signatures() if jit_kwargs is None: jit_kwargs = {} if keras.backend.backend() == "jax" and self.static_params: jit_kwargs |= {"static_argnames": self.static_params} self.jit_kwargs = jit_kwargs self.with_batch_dim = with_batch_dim self._jittable = jittable # Set the jit compilation flag and compile the `call` method # Set zea logger level to suppress warnings regarding # torch not being able to compile the function with log.set_level("ERROR"): self.set_jit(jit_compile) @property def output_keys(self) -> List[str]: """Get the output keys of the operation.""" return [self.output_key] + self.additional_output_keys @property def static_params(self): """Get the static parameters of the operation.""" return getattr(self.__class__, "STATIC_PARAMS", [])
[docs] def set_jit(self, jit_compile: bool): """Set the JIT compilation flag and set the `_call` method accordingly.""" self._jit_compile = jit_compile if self._jit_compile and self.jittable: self._call = jit(self.call, **self.jit_kwargs) else: self._call = self.call
def _trace_signatures(self): """ Analyze and store the input/output signatures of the `call` method. """ self._input_signature = inspect.signature(self.call) self._valid_keys = set(self._input_signature.parameters.keys()) | {self.key} @property def valid_keys(self) -> set: """Get the valid keys for the `call` method.""" return self._valid_keys @property def needs_keys(self) -> set: """Get a set of all input keys needed by the operation.""" return self.valid_keys @property def jittable(self): """Check if the operation can be JIT compiled.""" return self._jittable
[docs] def call(self, **kwargs): """ Abstract method that defines the processing logic for the operation. Subclasses must implement this method. """ raise NotImplementedError
[docs] def set_input_cache(self, input_cache: Dict[str, Any]): """ Set a cache for inputs, then retrace the function if necessary. Args: input_cache: A dictionary containing cached inputs. """ self._input_cache.update(input_cache) self._trace_signatures() # Retrace after updating cache to ensure correctness.
[docs] def set_output_cache(self, output_cache: Dict[str, Any]): """ Set a cache for outputs, then retrace the function if necessary. Args: output_cache: A dictionary containing cached outputs. """ self._output_cache.update(output_cache) self._trace_signatures() # Retrace after updating cache to ensure correctness.
[docs] def clear_cache(self): """ Clear the input and output caches. """ self._input_cache.clear() self._output_cache.clear()
def _hash_inputs(self, kwargs: Dict) -> str: """ Generate a hash for the given inputs to use as a cache key. Args: kwargs: Keyword arguments. Returns: A unique hash representing the inputs. """ input_json = json.dumps(kwargs, sort_keys=True, default=str) return hashlib.md5(input_json.encode()).hexdigest()
[docs] def __call__(self, *args, **kwargs) -> Dict: """ Process the input keyword arguments and return the processed results. Args: kwargs: Keyword arguments to be processed. Returns: Combined input and output as kwargs. """ if args: example_usage = f" result = {ops_registry.get_name(self)}({self.key}=my_data" valid_keys_no_kwargs = self.valid_keys - {"kwargs"} if valid_keys_no_kwargs: example_usage += f", {list(valid_keys_no_kwargs)[0]}=param1, ..., **kwargs)" else: example_usage += ", **kwargs)" raise TypeError( f"{self.__class__.__name__}.__call__() only accepts keyword arguments. " "Positional arguments are not allowed.\n" f"Received positional arguments: {args}\n" "Example usage:\n" f"{example_usage}" ) # Merge cached inputs with provided ones merged_kwargs = {**self._input_cache, **kwargs} # Return cached output if available if self.cache_outputs: cache_key = self._hash_inputs(merged_kwargs) if cache_key in self._output_cache: return {**merged_kwargs, **self._output_cache[cache_key]} # Filter kwargs to match the valid keys of the `call` method if "kwargs" not in self.valid_keys: filtered_kwargs = {k: v for k, v in merged_kwargs.items() if k in self.valid_keys} else: filtered_kwargs = merged_kwargs # Call the processing function # If you want to jump in with debugger please set `jit_compile=False` # when initializing the pipeline. processed_output = self._call(**filtered_kwargs) # Ensure the output is always a dictionary if not isinstance(processed_output, dict): raise TypeError( f"The `call` method must return a dictionary. Got {type(processed_output)}." ) # Merge outputs with inputs combined_kwargs = {**merged_kwargs, **processed_output} # Cache the result if caching is enabled if self.cache_outputs: if isinstance(self.cache_outputs, list): cached_output = { k: v for k, v in processed_output.items() if k in self.cache_outputs } else: cached_output = processed_output self._output_cache[cache_key] = cached_output return combined_kwargs
[docs] def get_dict(self): """Get the configuration of the operation. Inherit from keras.Operation.""" config = {} config.update({"name": ops_registry.get_name(self)}) config["params"] = { "key": self.key, "output_key": self.output_key, "cache_inputs": self.cache_inputs, "cache_outputs": self.cache_outputs, "jit_compile": self._jit_compile, "with_batch_dim": self.with_batch_dim, "jit_kwargs": self.jit_kwargs, } return config
def __eq__(self, other): """Check equality of two operations based on type and configuration.""" if not isinstance(other, Operation): return False # Compare the class name and parameters if self.__class__.__name__ != other.__class__.__name__: return False # Compare the name assigned to the operation name = ops_registry.get_name(self) other_name = ops_registry.get_name(other) if name != other_name: return False # Compare the parameters of the operations if not deep_compare(self.get_dict(), other.get_dict()): return False return True
class Filter(Operation): def _resolve_filter_axes(self, data, axes=None): """ Resolve the axes to filter over based on the axes parameter and with_batch_dim flag. Args: data: Input tensor axes: Tuple of axes to filter over, or None to filter all (non-batch) axes Returns: Tuple of resolved axes indices Raises: ValueError: If batch dimension is included in axes when with_batch_dim is True """ if axes is None: if self.with_batch_dim: return tuple(range(1, data.ndim)) else: return tuple(range(data.ndim)) else: axes = map_negative_indices(axes, data.ndim) if self.with_batch_dim and 0 in axes: raise ValueError("Batch dimension cannot be one of the axes to filter over.") return axes
[docs] @ops_registry("identity") class Identity(Operation): """Identity operation."""
[docs] def call(self, **kwargs) -> Dict: """Returns the input as is.""" return {}
[docs] @ops_registry("lambda") class Lambda(Operation): """Use any function as an operation.""" def __init__(self, func, **kwargs): # Split kwargs into kwargs for partial and __init__ sig = inspect.signature(func) func_params = set(sig.parameters.keys()) func_kwargs = {k: v for k, v in kwargs.items() if k in func_params} op_kwargs = {k: v for k, v in kwargs.items() if k not in func_params} Lambda._check_if_unary(func, **func_kwargs) super().__init__(**op_kwargs) self.func = partial(func, **func_kwargs) @staticmethod def _check_if_unary(func, **kwargs): """Checks if the kwargs are sufficient to call the function as a unary operation.""" sig = inspect.signature(func) # Remove arguments that are already provided in func_kwargs params = list(sig.parameters.values()) remaining = [p for p in params if p.name not in kwargs] # Count required positional arguments (excluding self/cls) required_positional = [ p for p in remaining if p.default is p.empty and p.kind in (p.POSITIONAL_ONLY, p.POSITIONAL_OR_KEYWORD) ] if len(required_positional) != 1: raise ValueError( f"Partial of {func.__name__} must be callable with exactly one required " f"positional argument, we still need: {required_positional}." )
[docs] def call(self, **kwargs): data = kwargs[self.key] if self.with_batch_dim: data = ops.map(self.func, data) else: data = self.func(data) return {self.output_key: data}
[docs] @ops_registry("mean") class Mean(Operation): """Take the mean of the input data along a specific axis.""" def __init__(self, keys, axes, **kwargs): super().__init__(**kwargs) self.keys, self.axes = _assert_keys_and_axes(keys, axes)
[docs] def call(self, **kwargs): for key, axis in zip(self.keys, self.axes): kwargs[key] = ops.mean(kwargs[key], axis=axis) return kwargs
[docs] @ops_registry("merge") class Merge(Operation): """Operation that merges sets of input dictionaries.""" def __init__(self, **kwargs): super().__init__(**kwargs) self.allow_multiple_inputs = True
[docs] def call(self, *args, **kwargs) -> Dict: """ Merges the input dictionaries. Priority is given to the last input. """ merged = {} for arg in args: if not isinstance(arg, dict): raise TypeError("All inputs must be dictionaries.") merged.update(arg) return merged
[docs] @ops_registry("stack") class Stack(Operation): """Stack multiple data arrays along a new axis. Useful to merge data from parallel pipelines. """ def __init__( self, keys: Union[str, List[str], None], axes: Union[int, List[int], None], **kwargs, ): super().__init__(**kwargs) self.keys, self.axes = _assert_keys_and_axes(keys, axes)
[docs] def call(self, **kwargs) -> Dict: """ Stacks the inputs corresponding to the specified keys along the specified axis. If a list of axes is provided, the length must match the number of keys. """ for key, axis in zip(self.keys, self.axes): kwargs[key] = keras.ops.stack([kwargs[key] for key in self.keys], axis=axis) return kwargs